../bin/select_random_lines_from_file.py -i results/snp_calling_differences_with_indels/bac_callable_vs_short_read_callable.above_threshold/REF.ALT_mismatch.snps  -o results/random_snp_differences.round_2_qc/should_be_REF.round_2_qc.snps  -v -L logs/select_random_snp_errors.log -n 100 
../bin/select_random_lines_from_file.py -i results/snp_calling_differences_with_indels/bac_callable_vs_short_read_callable.above_threshold/ALT.REF_mismatch.snps  -o results/random_snp_differences.round_2_qc/should_be_ALT2.round_2_qc.snps -v -L logs/select_random_snp_errors.log -n 100 
../bin/select_random_lines_from_file.py -i results/snp_calling_differences_with_indels/bac_callable_vs_short_read_callable/ALT.Missing.snps                       -o results/random_snp_differences.round_2_qc/should_be_ALT1.round_2_qc.snps -v -L logs/select_random_snp_errors.log -n 100 
